Table 5 Reactions of the Buchnera metabolic network that involve protons.
From: Deciphering the connectivity structure of biological networks using MixNet
MixNet class 7 | ||
|---|---|---|
substrate(s) | product(s) | |
proton+cpd-602 | → | cpd-1086 |
proton+super-oxide | → | hydrogen-peroxide+oxygen-molecule |
proton+hydroxy-methyl-butenyl-dip | → | delta(3)-isopentenyl-pp |
proton+hydroxy-methyl-butenyl-dip | → | cpd-4211 |
proton+3-dehydro-shikimate | → | shikimate |
proton+2,3-dihydrodipicolinate | → | delta1-piperideine-2-6-dicarboxylate |
proton+2-amino-3-oxo-4-phosphonooxybutyrate | → | 1-amino-propan-2-one-3-phosphate+carbon-dioxide |
proton+2-aceto-lactate | → | dioh-isovalerate |
proton+methylene-thf | → | 5-methyl-thf |
proton+l-aspartate-semialdehyde | → | homo-ser |
MixNet class 10 | ||
substrate(s) | product(s) | |
erythrose-4p | → | proton+erythronate-4p |
2-d-threo-hydroxy-3-carboxy-isocaproate | → | proton+cpd-7100 |
cpd-296 | ↔ | proton+lipoic-acid |
proton+oxygen-molecule | ↔ | proton |
sirohydrochlorin+fe+2 | → | proton+siroheme |
glc-6-p | → | proton+d-6-p-glucono-delta-lactone |