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Table 1 Summary of experiments

From: Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements

Experiment

Microarrays

qRT-PCR

name

ref

#samp

type

protocol

NerdErd

[22]

38

hgu133a2

SybrGreen

Strain

[23]

36

mouse430_2

TaqMan

AgeWT

[13]

11

mgu74av2

TaqMan

Lonely

[12]

14

hgu133a

TaqMan

Tsc

[24]

7

hgu133plus2

SybrGreen

Maqc_CD

[26]

8

hgu133plus2

TaqMan

  1. The first three columns contain general information about collected experiments: labels of the data sets used in our analysis (name), reference numbers (ref), and numbers of used samples (#samp). The fourth column describes a type of microarray used in each experiment: (type). The last column contains information about qRT-PCR protocol.