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Table 2 Number of correlated genes

From: Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements

 

NerdErd

Strain

AgeWT

Lonely

Tsc

Maqc_CD

A

8 (8)

9 (9)

33 (35)

6 (6)

11 (10)

859 (876)

N

8 (7)

9 (9)

33 (31)

6 (6)

11 (10)

845 (793)

D

8 (8)

8 (8)

28 (33)

6 (6)

10 (10)

835 (838)

F

8 (8)

9 (9)

33 (35)

5 (5)

7 (6)

710 (731)

FN

8 (7)

9 (9)

33 (31)

5 (5)

7 (6)

697 (645)

FD

7 (7)

8 (8)

27 (32)

5 (5)

6 (6)

669 (669)

  1. Number of correlated genes in each variant of filtering/mapping (rows) and a biological experiment (columns). In each cell, the first number stands for the new annotation, whereas the number in brackets stands for the old annotation.