Table 3 Number of SNPs and unassigned scaffolds ("Un") assigned to different chromosomes by the LODE procedure.
Chromosome | No. of SNPs assigned | No. of "Un" scaffolds assigned | Length of "Un" scaffolds in bp |
|---|---|---|---|
1 | 290 | 31 | 3632458 |
2 | 213 | 12 | 1399643 |
3 | 219 | 13 | 2375137 |
4 | 176 | 15 | 1177590 |
5 | 198 | 9 | 2050871 |
6 | 235 | 18 | 3492179 |
7 | 212 | 17 | 2416408 |
8 | 197 | 22 | 3299957 |
9 | 183 | 18 | 2257082 |
10 | 149 | 16 | 2017247 |
11 | 152 | 17 | 1655602 |
12 | 215 | 16 | 4401081 |
13 | 152 | 13 | 2066119 |
14 | 228 | 12 | 4702182 |
15 | 139 | 18 | 3049502 |
16 | 212 | 24 | 5697862 |
17 | 117 | 11 | 845416 |
18 | 95 | 11 | 1530906 |
19 | 97 | 11 | 1769762 |
20 | 75 | 7 | 559988 |
21 | 115 | 20 | 2921283 |
22 | 87 | 10 | 1083985 |
23 | 84 | 5 | 829315 |
24 | 86 | 6 | 607772 |
25 | 62 | 5 | 398973 |
26 | 121 | 21 | 2117068 |
27 | 66 | 6 | 392536 |
28 | 94 | 11 | 1571243 |
29 | 126 | 12 | 1981261 |
X | 293 | 78 | 25445183 |
Total | 4688 | 485 | 87745611 |