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Table 3 Novel amplification peaks in chrom. 19 reported by limited peel-off.

From: JISTIC: Identification of Significant Targets in Cancer

Location

Candidate driver genes

265456-781585 (19p13:3)

PTBP1 [21], BSG [22]

4105670-4353981 (19p13:3)

CHAF1A [23], SH3GL1 [24]

10539157-10628316 (19p13:2)

AP1 M2 [11], ILF3 [25]

34895742-35531840 (19q12)

Cyclin E1 [12]

48658163-48753325 (19q13:31)

LYPD3 [13]

61586503-63564951 (19q13:43)

BMZF3 [26]

  1. For each novel peak region of amplification detected by limited peel-off in chromosome 19 its location in the genome and suspected driver genes are shown. Each driver gene is accompanied by a reference that supports its oncogenic nature. All novel peaks contain at least one candidate driver gene.
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BMC Bioinformatics

ISSN: 1471-2105

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