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Table 3 Performance of single folding indexes on set C

From: Predictors of natively unfolded proteins: unanimous consensus score to detect a twilight zone between order and disorder in generic datasets

 

S n

S p

f p

AUC

Poodle-W

0.75

0.87

0.13

0.90

gVSL2

0.83

0.76

0.24

0.86

<E c >

0.74

0.81

0.19

0.86

<P>

0.72

0.80

0.20

0.83

HQ

0.69

0.75

0.25

0.78

  1. Performance of HQ, mean packing <P>, mean pairwise energy <E c >, gVSL2 and Poodle-W in discriminating natively unfolded proteins from folded ones among those in our own set C (see Methods). Mean packing threshold is fixed at 20.55 and mean pairwise energy threshold is fixed at -0.37 a.e.u.
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BMC Bioinformatics

ISSN: 1471-2105

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