Table 2 Comparison in the number of calls between CNstream and PennCNV

chr1:2151995..2236917

11

5

chr2:242633058..242645262

5

13

chr3:65166887..65187636

33

22

chr3:75511365..7553579

7

41

chr6:95118323..95118537

10

5

chr5:32142841..32171356

6

11

chr8:5590045..5591685

48

25

chr8:145064091..145083192

6

23

chr8:15447669..15455979

38

23

chr10:47013328..47173619

45

65

chr10:90934639..90954006

25

12

chr10:135116379..135167074

5

24

chr12:7884583..8017012

21

5

chr10:13522971..135284293

10

24

chr14:85518391..85557882

22

5

chr17:74878104..74905197

9

21

chr16:1192442..1265972

13

7

chr19:48267714..48350666

6

16

chr16:1744358..1781034

28

13

chr19:59423491..59445355

7

34

chr19:681297..717103

11

6

chr19:59994795..60018551

21

38

chr19:20385941..20528316

65

7

chr20:14815422..14856741

5

13

chr20:61323074..61366354

12

5

chr20:35443071..3548526

5

21

chr21:45756756..45788806

10

5

chr21:18981497..19000295

5

12

chr21:43647907..43659936

6

12

chr22:21169096..21190977

6

12

chr22:21223788..21337263

6

12

chr22:2408234..24235221

21

27