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Table 3 Top 10 genes for the bimodality scores

From: Comparison of scores for bimodality of gene expression distributions and genome-wide evaluation of the prognostic relevance of high-scoring genes

VRS WVRS dip
gene p q gene p q gene p q
PSPHL 0.147 0.483 ST18 0.360 0.703 HLA-DQB1 0.140 0.473
MAGEA2 0.012 0.158 UGT1A@ 0.056 0.311 HLA-DQA1 0.748 0.914
HLA-DQA1 0.748 0.914 CTNNA2 0.056 0.311 TFAP2B 0.024 0.216
FOXA1 0.027 0.225 HLA-DQA1 0.748 0.914 HLA-DQA1 0.205 0.560
ZIC1 0.023 0.213 UTS2 0.621 0.860 ERAP2 0.034 0.251
CRISP3 0.974 0.993 CALCA 0.539 0.821 HLA-DRB4 0.929 0.981
PCSK1 0.053 0.304 SCG3 0.622 0.878 NLRP2 0.162 0.506
DSG1 < 10-3 0.033 TFAP2B 0.024 0.216 IQGAP1 0.089 0.385
MAGEA4 < 10-3 0.028 MYH7 0.072 0.345 SAT1 0.712 0.901
UGT2B4 0.835 0.950 HAPLN1 0.072 0.345 DSCC1 0.072 0.346
pos kurtosis neg kurtosis likelihood ratio
gene p q gene p q gene p q
UGT1A@ 0.013 0.137 HLA-DQA1 0.764 0.913 PCSK1 0.304 0.622
CTNNA2 0.833 0.941 TFAP2B 0.010 0.120 MAGEA6 0.068 0.298
UTS2 0.457 0.742 SCGB1D2 0.566 0.807 CHGB 0.488 0.764
CALCA 0.304 0.622 SLC1A1 0.200 0.514 ACE2 0.321 0.636
SCG3 0.494 0.768 PEG10 0.570 0.811 MAGEA2 <10-03 0.015
MYH7 0.010 0.120 HLA-DQA1 0.238 0.557 FGB 0.785 0.921
HAPLN1 0.733 0.897 PSD3 0.067 0.297 DSG1 0.024 0.181
FGA 0.417 0.713 unknown 0.022 0.172 MSLN 0.138 0.423
HTR2C 0.016 0.148 ERAP2 0.303 0.622 UGT2B4 0.112 0.382
GLUD2 0.986 0.995 HLA-DQB1 0.243 0.561 CARTPT 0.382 0.691
bimodality index outlier sum    
gene p q gene p q    
PSPHL 0.147 0.449 FABP7 0.486 0.783    
FOXA1 0.027 0.189 S100A7 0.720 0.904    
HLA-DQA1 0.748 0.909 FAM5C 0.853 0.954    
ZIC1 0.023 0.175 CRISP3 0.667 0.884    
CRISP3 0.974 0.990 GRIA2 0.662 0.882    
TDRD12 0.079 0.332 VGLL1 0.034 0.224    
TFAP2B 0.024 0.178 MAGEA6 0.055 0.287    
MAGEA3 0.032 0.206 ALB 0.196 0.551    
UGT8 0.023 0.175 ASCL1 0.530 0.811    
S100A7 0.817 0.936 MAGEA3 0.151 0.489    
  1. For each of the scores the table contains the 10 top-scoring genes. Also the p-values obtained by the logrank test and the corresponding q-values are given.