Table 3 Comparison with other methods
| Â | Â | Â | Â | Â | # or % symmetric proteins found | |
|---|---|---|---|---|---|---|
Program name | Â | Dataset | Â | Fold name | Â | Â |
| Â | Â | Â | Â | Â | Others | SymD (SCOP 1.73, ASTRAL 40) |
DAVROS [9] | Â | CATH | Â | LRR | 89% | 84-96% |
| Â | Â | Â | Â | TIM barrels | 60% | 69-83% |
|  |  |  |  | β-trefoils | 67% | 95-100% |
OPAAS [6] |  | SCOP 1.55 |  | β-propellers | 86% | 100% |
|  |  |  |  | β-trefoils | 72% | 95-100% |
Swelfe [4] |  | ASTRAL 50 |  |  | 172¶ | 968-1385 |
RQA [11] |  | SCOP 1.69 |  | β-propellers | 75% | 100% |
|  |  |  |  | β-trefoils | 86% | 95-100% |
GANGSTA+[5] | Â | SCOP 1.73, | Â | ferredoxin-like | 68 | 16-58 |
| Â | Â | ASTRAL 40 | Â | immunoglobulin-like | 31 | 2-33 |
|  |  |  |  | β-trefoil | 23 | 39-41 |
| Â | Â | Â | Â | four helical up-and-down bundle | 16 | 16-33 |
| Â | Â | Â | Â | DNA clamp | 14 | 16-20 |
| Â | Â | Â | Â | 7-bladed b-propellers | 13 | 35 |
| Â | Â | Â | Â | TIM barrels | 12 | 223-268 |
|  |  |  |  | γ-crystalline-like | 10 | 7-9 |