From: Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests
Protein | Alignment length | LGT inferred by Prunier (slow and fast version) | |||||
---|---|---|---|---|---|---|---|
(* indicates LGT diagnosis by Brown et al. ) | 23 genes tree reference tree | 14 genes tree reference tree | |||||
Slow | Fast-80 | Fast-90 | Slow | Fast-80 | Fast-90 | ||
aspartyl-tRNA synthetase | 249 | 4 | 8 | 8 | 6 | 7 | 7 |
glutamyl-tRNA synthetase | 188 | 12 | 12 | 12 | 13 | 11 | 11 |
leucyl-tRNA synthetase | 358 | 9 | 11 | 11 | 11 | 13 | 13 |
initiation factor 2 | 337 | 8 | 9 | 0 | 3 | 3 | 1 |
elongation factor G | 536 | 10 | 11 | 5 | 11 | 9 | 4 |
elongation factor Tu | 340 | 0 | 9 | 9 | 7 | 9 | 9 |
ribosomal protein L2 | 192 | 2 | 13 | 1 | 6 | 8 | 0 |
ribosomal protein S5 | 131 | 7 | 2 | 2 | 4 | 2 | 2 |
ribosomal protein S8 | 118 | 7 | 5 | 0 | 7 | 5 | 0 |
ribosomal protein S11 | 110 | 13 | 1 | 1 | 11 | 1 | 1 |
DNA-directed RNA polymerase β chain | 537 | 0 | 8 | 2 | 8 | 7 | 2 |
DNA topoisomerase I | 236 | 10 | 13 | 4 | 8 | 12 | 3 |
DNA polymerase III subunit | 194 | 3 | 2 | 1 | 2 | 2 | 0 |
signal recognition particle protein | 298 | 3 | 8 | 1 | 4 | 5 | 1 |
alanyl-tRNA synthetase (*) | 502 | 5 | 7 | 3 | 4 | 11 | 3 |
histidyl-tRNA synthetase (*) | 166 | 7 | 18 | 9 | 14 | 15 | 11 |
isoleucyl-tRNA synthetase (*) | 552 | 8 | 9 | 7 | 10 | 9 | 8 |
methionyl-tRNA synthetase (*) | 306 | 11 | 9 | 7 | 0 | 12 | 10 |
phenylalanyl-tRNA synthetase β subunit (*) | 177 | 7 | 11 | 3 | 6 | 11 | 3 |
threonyl-tRNA synthetase (*) | 305 | 13 | 16 | 16 | 11 | 16 | 16 |
valyl-tRNA synthetase (*) | 538 | 9 | 12 | 12 | 7 | 9 | 8 |
aminopeptidase P (*) | 95 | 19 | 21 | 21 | 24 | 21 | 21 |
rRNA dimethylase (*) | 126 | 11 | 13 | 2 | 8 | 11 | 2 |