Figure 1
From: Spatial normalization improves the quality of genotype calling for Affymetrix SNP 6.0 arrays

 jk against ε xy scatterplots with smoothed densities color representation. The plots correspond to the first array in Set 1 (see Method Section). Dark and light shades of blue indicate the presence of many and few points, respectively. (a) Higher  jk is accompanied by larger residual variance on the raw scale. (b) Glog transformation makes  jk and the variability of ε xy approximately independent.