Interaction prediction and classification of PDZ domains

BMC Bioinformatics

Table 4 Prediction results after feature reduction.

	TPR		FPR		Precision		AUC		Accuracy (%)
	Trigram	Bigram	Trigram	Bigram	Trigram	Bigram	Trigram	Bigram	Trigram	Bigram
Interaction prediction	0.744	0.786	0.096	0.07	0.798	0.851	0.905	0.948	85	88.1
Classification*	0.942	0.86	0.044	0.096	0.942	0.859	0.994	0.966	94.2	86

* Weighted average result for multi-class learning (Class I, Class II, Class I-II)

ISSN: 1471-2105