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Table 1 Marginal likelihood of different models

From: Robust probabilistic superposition and comparison of protein structures

Protein PDB IDs Student t K Laplace Gauss
GroEL 1AON-1OEL -4328.57 -4307.22 -5132.84 -5722.35
DNA Pol 1IH7-1IG9 -5574.80 -5750.12 -6340.01 -8011.05
RAN 1RRP-1BYU -1124.86 -1176.53 -1795.92 -2286.10
Topo II 1BGW-1BJT -4496.17 -4553.50 -7210.74 -8042.00
Pneumolysin 2BK2-2BK1 -2692.73 -2465.09 -5195.85 -5491.90
ER 3ERD-3ERT -538.11 -622.69 -1290.81 -1980.96
RNA Pol 1QLN-1MSW -5296.61 -5455.79 -8471.69 -10168.07
Adenylate Kinase 1AKE-4AKE -1499.73 -1502.75 -1685.11 -2000.35
Myosin 1B7T-1DFK -4819.91 -5046.02 -6380.11 -7701.83
Synthetic data Student t -9179.46 -9253.48 -12465.97 -13951.94
Synthetic data Gauss -5108.73 -5112.43 -5077.97 -5115.98
  1. Logarithm of the marginal likelihood P(M|D) of the different displacement models obtained for nine structure pairs undergoing domain movements. Highlighted in boldface are the maximum log-marginal likelihood values. The last two rows at the bottom report the log-marginal likelihoods for synthetic data generated according to a Student t and a Gauss distribution.