| PlantMetabolomics.org | SetupX | MeltDB | MetaboAnalyst | MetabolomeExpress |
---|---|---|---|---|---|
Peer-reviewed biological content | Â | Â | Â | Â | Â |
Number of peer-reviewed, biology-focused publication datasets publicly available | 0* | 0 | 0 | 0 | 8 |
Data upload/storage | Â | Â | Â | Â | Â |
Accepts public raw data submissions | Â | Â | Â | + | + |
Accepts public processed data submissions | + | Â | Â | Â | + |
Long-term data storage | + | + | + | Â | + |
Data resources for download | Â | Â | Â | Â | Â |
MSI-compliant metadata | + | + | Â | Â | + |
Raw GC/MS data files | Â | + | Â | Â | + |
Mass peak lists | Â | + | Â | Â | + |
Library match lists | Â | + | Â | Â | + |
Data matrices | + | + | Â | Â | + |
Mass-spectral and retention-index libraries | Â | Â | Â | Â | + |
Precomputed fold-change/comparative statistical results | + | Â | Â | Â | + |
PCA Results | Â | Â | + | Â | + |
HCA Results | Â | Â | + | Â | + |
Statistical heatmap spreadsheets | Â | Â | Â | Â | + |
Metabolite-metabolite correlation network graphs | Â | Â | Â | Â | + |
Metabolite-metabolite correlation tables | Â | Â | Â | Â | + |
MapMan importable fold-change data files | Â | Â | Â | Â | + |
Cytoscape-importable fold-change data files | Â | Â | Â | Â | + |
Raw data processing | Â | Â | Â | Â | Â |
Provides integrated access to peak detection | Â | Â | + | + | + |
Provides own peak detection algorithm | Â | Â | Â | Â | + |
Performs peak identification without offline pre-processing | Â | Â | Â | Â | + |
Supports upload of custom MSRI libraries | Â | Â | Â | Â | + |
Statistics | Â | Â | Â | Â | Â |
Allows users to perform custom statistical comparisons | + | Â | + | + | + |
Fold change | + | Â | + | + | + |
t-test | Â | Â | + | + | + |
Principal Components Analysis (PCA) | Â | Â | + | + | + |
Cluster Analysis | Â | Â | + | + | + |
Metabolite-metabolite correlation Analysis | Â | Â | Â | Â | + |
Raw data visualisation | Â | Â | Â | Â | Â |
Provides chromatogram visualisation | Â | Â | + | Â | + |
Chromatogram viewer displays TICs | Â | Â | + | Â | + |
Chromatogram viewer displays EICs | Â | Â | Â | Â | + |
Chromatogram viewer allows overlays of multiple chromatograms | Â | Â | Â | Â | + |
Chromatogram viewer zoomable | Â | Â | Â | Â | + |
Provides MS spectral visualisation | Â | Â | + | Â | + |
Provides MS spectra of library entries | Â | Â | + | Â | + |
Provides MS spectra of arbitrary MS scans | Â | Â | Â | Â | + |