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Table 1 Clustering of amino acids for BLOSUM62 matrix by the k-means algorithm.

From: Amino acid "little Big Bang": Representing amino acid substitution matrices as dot products of Euclidian vectors

2:

C

I

L

M

V

F

W

Y

 

  

A

G

P

S

T

D

E

N

Q

K

R

H

 

3:

F

W

Y

C

I

L

M

V

  

A

G

P

S

T

D

E

N

Q

K

R

H

 

4:

F

W

Y

C

I

L

M

V

 

A

G

P

S

T

D

E

N

Q

K

R

H

 

5:

F

W

Y

C

I

L

M

V

 

A

G

P

S

T

D

E

N

Q

K

R

H

6:

F

W

Y

C

I

L

M

V

A

T

G

P

S

D

E

N

Q

K

R

H