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Table 1 Construction of the test regions for the case studies

From: Non-coding RNA detection methods combined to improve usability, reproducibility and precision

  Escherichia coli str. K-12 substr. MG1655 Listeria monocytogenes EGD-e Streptococcus pyogenes MGAS5005
regions size 222873 bp 284982 bp 212215 bp
known ncRNA 151 consisting of 11900 bp (5.3%)
[29, 35]
101 consisting of 19440 bp (6.8%) [36] 73 consisting of 14625 bp (6.9%) [34]
intergenic background 32754 bp (14.7%) 37317 bp (13.1%) 37067 bp (17.5%)
protein genes 180505 bp (81.0%) 231107 bp (81.1%) 163416 bp (77,0%)