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Table 1 Results on Aurum dataset. Precision (percentage) and absolute number of matching IDs (within brackets) and ΔSc calculated on MALDI-TOF data by MassSpec algorithm, DataExplorer (DE) and MassLynx (ML).

From: Accurate peak list extraction from proteomic mass spectra for identification and profiling studies

  Basic Incl. optional funct.  
  MassSpec DE a ML b MassSpec DE a ML b  
   Aurum 20.3%(28.6) 19.6%(27.6) 17.5%(24.5) 21.3%(29.5) 19.6%(27.2) 17.7%(24.3) Prec
  101.7 97.3 92.7 91.5 96.7 93.6 ΔSc
   PDIA1 27.1%(35) 26.4%(34) 24%(31) 32.4%(36) 29.7%(33) 27%(30) Prec
  161 147 130 196 161 120 ΔSc
  1. Default parameters: a advanced baseline correction, peak detection and peak monoisotoping; b mass measure and TOF transform.
  2. Mean values are reported for 20 proteins of the Aurum dataset