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Table 2 Stacking and base-pairing parameters

From: Computing DNA duplex instability profiles efficiently with a two-state model: trends of promoters and binding sites

Δ G K L S T

KL

A

T

G

C

 

A

-1.49

-1.72

-1.44

-2.19

 

T

-0.57

-1.49

-0.93

-1.81

 

G

-1.81

-2.19

-1.82

-2.55

 

C

-0.93

-1.44

-1.29

-1.82

 

AT

 

0.64

  

ΔG BP

GC

 

0.12

  
  1. Hydrogen-bond and base-stacking parameter values used in the numerical calculations of the destabilization profiles.
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BMC Bioinformatics

ISSN: 1471-2105

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