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Table 5 Comparison of the composition of the amino acids in hyperthermophilic and mesophilic proteins and their significance p-values of t-test and paired t-test.

From: A novel scoring function for discriminating hyperthermophilic and mesophilic proteins with application to predicting relative thermostability of protein mutants

Amino acid

Composition in HP

Composition in MP

p-value (t-test)

p-value (paired t-test)

S

0.044 ± 0.016

0.050 ± 0.015

9.60×10-9

5.61×10-12

Q

0.019 ± 0.011

0.037 ± 0.015

6.81×10-85

1.24×10-94

N

0.035 ± 0.014

0.035 ± 0.015

0.88

0.85

T

0.042 ± 0.014

0.055 ± 0.016

1.02×10-40

2.44×10-56

C

0.009 ± 0.011

0.010 ± 0.011

0.36

0.08

G

0.075 ± 0.019

0.079 ± 0.020

9.14×10-4

9.68×10-10

A

0.066 ± 0.023

0.080 ± 0.028

3.41×10-48

1.08×10-87

H

0.017 ± 0.010

0.024 ± 0.013

3.00×10-20

4.64×10-40

M

0.024 ± 0.011

0.026 ± 0.010

0.02

3.00×10-3

Y

0.033 ± 0.014

0.027 ± 0.013

6.10×10-15

4.47×10-31

F

0.038 ± 0.015

0.033 ± 0.014

3.00×10-8

1.29×10-14

V

0.086 ± 0.021

0.082 ± 0.020

2.32×10-4

5.36×10-7

L

0.089 ± 0.021

0.089 ± 0.022

0.73

0.59

P

0.041 ± 0.015

0.040 ± 0.014

0.39

0.16

I

0.077 ± 0.020

0.066 ± 0.019

6.46×10-20

3.15×10-29

W

0.008 ± 0.007

0.007 ± 0.007

0.05

3.00×10-3

D

0.050 ± 0.015

0.057 ± 0.016

1.92×10-12

5.64×10-22

E

0.097 ± 0.023

0.079 ± 0.022

6.73×10-38

5.63×10-75

K

0.091 ± 0.023

0.060 ± 0.023

1.21×10-87

5.25×10-117

R

0.056 ± 0.023

0.055 ± 0.023

0.57

0.36