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Table 2 Number of MAQC data sets for which each estimator ranked in the top four.

From: Validation of differential gene expression algorithms: Application comparing fold-change estimation to hypothesis testing

algorithm cross validation posterior predictive expected loss
Wilcoxon stat. with emp. null 0 0
t stat. with emp. null 0 0
Wilcoxon stat. with locfdr 0 0
t stat. with locfdr 1 3
moderated t stat. with locfdr 3 3
moderated t stat. with limma 2 0
fold change shrinkage 0 0
Bayes factor 3 0
BIC 2 3
AICc 1 3
fold change > 1.41 0 0
fold change > 1 0 0
fold change > 2 0 0
all nulls true 0 0
all nulls false 0 0