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Table 5 The number of tagging rules generated under the two models using the FastTagger algorithm (min_r 2 = 0.9).

From: FastTagger: an efficient algorithm for genome-wide tag SNP selection using multi-marker linkage disequilibrium

 

max_size

#rules

memory

  

Fast-COOC

Fast-1vsR

Fast-COOC

Fast-1vsR

chr19

2

121,122

120,627

6.63 MB

6.63 MB

chr21

2

169,864

168,936

11.43 MB

11.43 MB

chr22

2

156,134

155,223

8.14 MB

8.13 MB

chr19

3

1,421,519

377,773

38.69 MB

13.29 MB

chr21

3

2,713,338

657,767

101.11 MB

29.92 MB

chr22

3

2,590,826

573,738

67.28 MB

19.21 MB