| |
Allele
|
Binders
|
Non-Binders
|
Total
|
DynaPredPOS
|
NetMHC
|
SVMHC
|
YKW
|
|---|
| | |
(n)
|
(n)
|
(n)
|
AUC
|
AUC
|
AUC
|
AUC
|
|
1
|
A*0201
|
33
|
143
|
176
|
0.92
|
0.94
|
0.82
|
0.93
|
|
2
|
A*0301
|
11
|
165
|
176
|
0.77
|
0.92
|
0.70
|
0.85
|
|
3
|
A*1101
|
17
|
159
|
176
|
0.84
|
0.89
|
0.72
|
0.83
|
|
4
|
A*2402
|
37
|
139
|
176
|
0.90
|
0.78
|
0.90
|
0.64
|
|
5
|
B*0702
|
9
|
167
|
176
|
0.86
|
0.98
|
0.72
|
0.68
|
|
6
|
B*0801
|
10
|
166
|
176
|
0.97
|
0.92
|
0.97
|
0.61
|
|
7
|
B*1501
|
14
|
162
|
176
|
0.71
|
0.92
|
0.71
|
0.80
|
| |
Average AUC
| | | |
0.85
|
0.90
|
0.79
|
0.76
|
- A set of 176 novel peptides, generated and tested by Lin et al [15], were used to test the prediction accuracy of the four methods in this study. The average AUC for each method is included at the bottom of each column.
