Table 3 Illumina long-clone reads statistics. Summary of the Illumina long-clone reads generated by MetaSim for each of the three synthetic metagenome datasets LC, MC and HC.
From: Short clones or long clones? A simulation study on the use of paired reads in metagenomics
LC-ilm-L | MC-ilm-L | HC-ilm-L | |
|---|---|---|---|
Simulated reads | 200,000 | 200,000 | 200,000 |
Read length | 75 bp | 75 bp | 75 bp |
Clone length | 1,900 bp | 1,900 bp | 1,900 bp |
Simulated base pairs | 15,000,000 | 15,000,000 | 15,000,000 |
Insertions | 0 | 0 | 0 |
Deletions | 0 | 0 | 0 |
Substitutions | 227,880 (1.5%) | 228,256 (1.5%) | 228,262 (1.5%) |