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Table 6 Correct proteins as a function of conditional probability. Number of proteins predicted correctly as a function of the total conditional probability of the top k paths. Results are shown for the data set without signal peptide (n = 247), with correctness being measured with τ = 5.

From: Decoding HMMs using the k best paths: algorithms and applications

Probability of top k paths k= 10 k= 100 k= 1000
  Correct Incorrect Correct Incorrect Correct Incorrect
< 0.01 33 98 31 72 33 45
0.01 - 0.5 42 64 60 37 82 27
0.5 - 1 8 2 38 9 53 7