Table 6 Correct proteins as a function of conditional probability. Number of proteins predicted correctly as a function of the total conditional probability of the top k paths. Results are shown for the data set without signal peptide (n = 247), with correctness being measured with Ï„ = 5.
From: Decoding HMMs using the k best paths: algorithms and applications
Probability of top k paths | k= 10 | k= 100 | k= 1000 | |||
|---|---|---|---|---|---|---|
| Â | Correct | Incorrect | Correct | Incorrect | Correct | Incorrect |
< 0.01 | 33 | 98 | 31 | 72 | 33 | 45 |
0.01 - 0.5 | 42 | 64 | 60 | 37 | 82 | 27 |
0.5 - 1 | 8 | 2 | 38 | 9 | 53 | 7 |