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Table 4 AUC results for 200 query set. AUC results for QP Tableau, SHEBA and VAST are taken from [16], which used exactly the same query set and dataset as in our experiments. For IR Tableau, TableauSearch and Yakusa, the output of a query is a list of all proteins along with scores.

From: A fast indexing approach for protein structure comparison

Method AUC
IR Tableau 0.948
Yakusa 0.950
TableauSearch 0.871
QP tableau 0.925
SHEBA 0.941
VAST 0.890
TOPS 0.871