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Table 1 Effect of physical properties on protein structure alignment with CMOS

From: Exploiting physical properties in protein structure alignment

Physical Property % matches eliminated % deviation from optimal Average speed up in CMOS
Secondary Structures 24 0.8 5x
Torsion angles 28 14 N.A.
Hydropathy 12 7 N.A.
Solvent accessibility 42 16 N.A.