Figure 2
From: The Musite open-source framework for phosphorylation-site prediction
Simplified UML diagram of Musite. Musite architecture contains six modules loosely coupled with each other. The data module defines the core data structure. The classifier module contains a set of binary classifiers. The feature extraction module defines the features to be extracted from data and used in classifiers. The training and prediction module defines the machine learning procedure. The I/O module provides utilities for reading/writing different types of files and converting between them. The UI module provides users with a biologist-friendly GUI.