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Table 1 BLAST performance for ortholog detection

From: Detection of gene orthology from gene co-expression and protein interaction networks

Datasets

AUC

Mouse-Human (PPI)

90.39

Mouse-Fly (PPI)

92.62

Mouse-Yeast (PPI)

96.14

Human-Fly (PPI)

88.89

Human-Yeast (PPI)

85.63

Yeast-Fly (PPI)

75.03

Mouse-Human (gene-coexpression)

90.40

  1. Performance of the Reciprocal BLAST hit method on the fly, yeast, human and mouse protein-protein interaction datasets from DIP as well as the gene coexpression networks for mouse and human from GEO.
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BMC Bioinformatics

ISSN: 1471-2105

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