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Table 4 KEGG ortholog sample tables

From: Detection of gene orthology from gene co-expression and protein interaction networks

Mouse Protein

Human Protein

BLASTp score

RW 1HOP

SP 1HOP

RW 2HOP

SP 2HOP

BaryCenter

betweenness

Degree

HITS

P05627

P05412

481

104

197.35

612

290.27

0.71

0.69

0.01

0.26

P36898

P36894

725

28.13

222.85

90.66

576.51

0.35

0.77

0.01

3.06E- 10

P39429

Q12933

870

48

126.18

150.47

187.45

0.79

0.11

0.01

1.20E- 4

  1. KEGG orthologs detected using the Ensemble classifier utilizing all network features. The orthologs shown in the above table were missed by the BLAST logistic regression classifier.
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BMC Bioinformatics

ISSN: 1471-2105

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