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Table 2 Memory usage

From: TurboFold: Iterative probabilistic estimation of secondary structures for multiple RNA sequences

 

Memory Usage (Megabytes) for

 

K = 3

K = 5

K = 10

TurboFold-MEA

111.4

161.9

235.1

RAF

184.1

381.1

518.2

LocARNA

204.2

195.9

296.3

CentroidAlifold

48.4

49.6

50.1

RNAalifold

49.5

49.1

49.7

MXScarna

47.0

46.9

47.1

CentroidHomfold

52.6

55.6

51.2

  1. The memory usage of the methods on timing/memory datasets. Each column shows the memory usage of the methods on one dataset, indicated by number of sequences.
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BMC Bioinformatics

ISSN: 1471-2105

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