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Figure 4 | BMC Bioinformatics

Figure 4

From: ArrayInitiative - a tool that simplifies creating custom Affymetrix CDFs

Figure 4

Number of probe pairs removed by individual filter sets. Summary of number of probe pairs removed from standard probe sets -- those having 16 probe pairs -- by each of the three filter sets. Presented for each custom CDF are the total number of probe sets that survived the cleansing process. Default CDF = 12,387 standard probe sets, Upton CDF = 12,386 standard probe sets, BaFL CDF = 10,981 standard probe sets, BaFL + Upton = 10,927 standard probe sets.

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