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Table 3 Frequencies of occurrence for each residues and character class in the retained patterns.

From: Extraction of consensus protein patterns in regions containing non-proline cis peptide bonds and their functional assessment

  Amino acid frequencies (%)
  Exact pattern discovery Chemical equivalency set Structural equivalency set
A (alanine) 8 5 6
R (arginine) 3 2 2
N (aspargine) 4 3 3
D (aspartic acid) 6 4 4
C (cysteine) 1 1 1
E (glutamic acid) 5 4 3
Q (glutamine) 2 1 2
G (glycine) 13 9 10
H (histidine) 3 2 2
I (isoleucine) 5 3 3
L (leucine) 9 6 6
K (lysine) 4 3 3
M (methionine) 2 1 1
F (phenylalanine) 4 3 2
P (proline) 6 4 4
S (serine) 7 5 5
T (threonine) 6 3 3
W (tryptophan) 2 2 1
Y (tyrosine) 4 3 2
V (valine) 7 4 4
AG/ITV - 6 10
DE/DLN - 3 7
FY/KMR - 3 5
QN/EQ - 2 2
ILMV/FHWY - 12 7
ST/CS - 5 2
KR/- - 3 -