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Table 3 Performance comparison between different methods in precision and recall for filamentous growth pathway.

From: CASCADE_SCAN: mining signal transduction network from high-throughput data based on steepest descent method

Method Precision (%) Recall (%)
CASCADE_SCAN 36 89
NetSearch 33 64
PathFinder 28 82
ILP (λ = 0.50) 29 73
  1. The results CASCADE_SCAN were obtained from four independent experiments using three seed proteins, and one experiment for four seed proteins. (PPI score threshold: 0.900, credible PPI score threshold: 0.950, DFS path length: 5). Note, the results of color-coding algorithm, NetSearch, PathFinder and ILP were obtained from Zhao's paper.