From: Pathway-based analysis using reduced gene subsets in genome-wide association studies
 | FPC-BIC | FPC-AIC | GSEA | AML |
---|---|---|---|---|
Pathway | P-value (FDR, FWER) | P-value (FDR, FWER) | P-value (FDR, FWER) | P-value (FDR, FWER) |
1. Cytokine Network | <0.001 (0.006, 0.006) | <0.001 (0.001, 0.001) | 0.020 (0.182, 0.945) | 0.888 (0.911, 1.000) |
2. Jak-STAT signaling pathway | <0.001 (0.004, 0.008) | <0.001 (0.001, 0.002) | 0.001 (0.017, 0.080) | 0.104 (0.518, 1.000) |
3. Dendritic cells in regulating TH1 and TH2 Development | <0.001 (0.005, 0.015) | <0.001 (0.004, 0.019) | 0.108 (0.448, 1.000) | 0.634 (0.906, 1.000) |
4. Cytokines and Inflammatory Response | <0.001 (0.005, 0.020) | 0.001 (0.006, 0.057) | 0.127 (0.455, 1.000) | 0.710 (0.917, 1.000) |
5. Cytokine-cytokine receptor interaction | <0.001 (0.005, 0.023) | <0.001 (0.004, 0.027) | 0.004 (0.090, 0.534) | 0.005 (0.494, 0.624) |
6. Role of BRCA1, BRCA2 and ATR in Cancer Susceptibility | <0.001 (0.005, 0.037) | <0.001 (0.001, 0.001) | 0.243 (0.560, 1.000) | 0.014 (0.390, 0.871) |
7. TNFR2 Signaling Pathway | 0.001 (0.009, 0.099) | <0.001 0.004, 0.021 | 0.249 (0.559, 1.000) | 0.303 (0.641, 1.000) |
8. Calcium signaling pathway | 0.022 (0.166, 1.000) | 0.001 (0.040, 0.591) | <0.001 (0.009, 0.009) | 0.002 (0.362, 0.655) |
9. Axon guidance | 0.017 (0.165, 0.997) | 0.040 (0.139, 1.000) | 0.001 (0.005, 0.010) | 0.238 (0.600, 1.000) |
10. ECM-receptor interaction | 0.792 (0.858, 1.000) | 0.392 (0.461, 1.000) | <0.001 (0.004, 0.012) | 0.197 (0.600, 1.000) |
11. Cell adhesion molecules (CAMs) | 0.332 (0.520, 1.000) | 0.011 (0.081, 0.957) | 0.001 (0.007, 0.027) | 0.023 (0.363, 0.994) |