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Figure 3 | BMC Bioinformatics

Figure 3

From: Software comparison for evaluating genomic copy number variation for Affymetrix 6.0 SNP array platform

Figure 3

Bland-Altman plots comparing the four software packages for a single representative sample. Data from chromosome 22 for a single representative sample are displayed comparing (a) CRLMM and APT, (b) CRLMM and PennCNV, (c) Aroma.Affymetrix and CRLMM, (d) Aroma.Affymetrix and APT, (e) PennCNV and Aroma.Affymetrix, and (f) PennCNV and APT. The points represent locus-level copy number and the line denotes a locally-weighted average to the points.

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BMC Bioinformatics

ISSN: 1471-2105

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