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Table 2 Number of gene identifiers associated with annotation databases

From: Algal Functional Annotation Tool: a web-based analysis suite to functionally interpret large gene lists using integrated annotation and expression data

Identifier Type

Total Gene IDs

KEGG

Reactome

Panther

Gene Ontology

MapMan

KOG

Pfam

InterPro

JGI v3.0

14598

5348

2740

1147

6563

5214

9139

7166

7532

JGI v4.0

16706

4232

1949

1085

7568

3171

9973

7305

8151

Augustus v5.0

16888

4686

2983

1673

4334

3160

5123

8202

5202

Augustus u10.2

17302

4583

3326

1913

6956

3892

8977

8691

7464

  1. Number of Chlamydomonas reinhardtii identifiers with at least one functional annotation for each primary database, shown per identifier type.
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BMC Bioinformatics

ISSN: 1471-2105

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