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Table 4 A fragment of the text output of EMBOSS Matcher (see Figure 7)

From: Applications of the pipeline environment for visual informatics and genomics computations

########################################
# Program: matcher
# Rundate: Tue 2 Nov 2010 15:50:56
# Commandline: matcher
# -asequence tsw:hba_human
# -bsequence tsw:hbb_human
# -outfile/panfs/tmp/pipeline-edu/pipelnvr/2010November02_15h50m48s631ms/Matcher_1.Output-1.matcher
# Align_format: markx0
# Report_file:/panfs/tmp/pipeline-edu/pipelnvr/2010November02_15h50m48s631ms/Matcher_1.Output-1.matcher
#########################################
#=======================================
#
# Aligned_sequences: 2
# 1: HBA_HUMAN
# 2: HBB_HUMAN
# Matrix: EBLOSUM62
# Gap_penalty: 14
# Extend_penalty: 4