Table 1 The twenty yeast proteins involved in simulated dataset pair Z and the ranking of them by DCEA methods DCp, DCe, signed WGCNA, ASC, and LRC separately.
From: Link-based quantitative methods to identify differentially coexpressed genes and gene Pairs
| Â | DCEA methods | ||||
|---|---|---|---|---|---|
protein | DCp | Dce | signed-WGCNA | ASC | LRC |
PHO2 | 1 | 1 | 3 | 1 | 5 |
MBP1_SWI6 | 2 | 3 | 8 | 2 | 8 |
FLO1 | 3 | 2 | 1 | 10 | 7 |
FLO10 | 4 | 4 | 2 | 6 | 4 |
TRP4 | 5 | 5 | 4 | 7 | 9 |
CLB5 | 6 | 6 | 14 | 3 | 18 |
CLB6 | 7 | 8 | 18 | 4 | 19 |
ACE2 | 8 | 14 | 16 | 15 | 1 |
SWI4 | 9 | 15 | 5 | 5 | 16 |
CDC11 | 10 | 7 | 9 | 12 | 17 |
CDC10 | 11 | 11 | 10 | 13 | 10 |
SWI4_SWI6 | 12 | 16 | 6 | 8 | 12 |
HTB1 | 13 | 13 | 7 | 11 | 15 |
ACT1 | 14 | 12 | 13 | 14 | 6 |
CAF4 | 15 | 9 | 19 | 19 | 3 |
LEU2 | 16 | 17 | 11 | 9 | 13 |
SPT16 | 17 | 18 | 15 | 18 | 11 |
HO | 18 | 10 | 17 | 16 | 2 |
CTS1 | 19 | 19 | 12 | 17 | 14 |
SNF6 | 20 | 20 | 20 | 20 | 20 |