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Table 1 The twenty yeast proteins involved in simulated dataset pair Z and the ranking of them by DCEA methods DCp, DCe, signed WGCNA, ASC, and LRC separately.

From: Link-based quantitative methods to identify differentially coexpressed genes and gene Pairs

  DCEA methods
protein DCp Dce signed-WGCNA ASC LRC
PHO2 1 1 3 1 5
MBP1_SWI6 2 3 8 2 8
FLO1 3 2 1 10 7
FLO10 4 4 2 6 4
TRP4 5 5 4 7 9
CLB5 6 6 14 3 18
CLB6 7 8 18 4 19
ACE2 8 14 16 15 1
SWI4 9 15 5 5 16
CDC11 10 7 9 12 17
CDC10 11 11 10 13 10
SWI4_SWI6 12 16 6 8 12
HTB1 13 13 7 11 15
ACT1 14 12 13 14 6
CAF4 15 9 19 19 3
LEU2 16 17 11 9 13
SPT16 17 18 15 18 11
HO 18 10 17 16 2
CTS1 19 19 12 17 14
SNF6 20 20 20 20 20
  1. The proteins are sorted by the DCp ranks. Bold refers to the truly differentially regulated genes (DRGs) in the simulation.