Table 6 Assembly results for the Yoruban male genome with scaffolding
From: Parallelized short read assembly of large genomes using de Bruijn graphs
PASHA | ABySS | |
|---|---|---|
NG50 | 2,294 | 1,326 |
max | 54,491 | 29,862 |
mean | 1,948 | 1,170 |
median | 973 | 636 |
genome coverage | 66.94% | 71.52% |
no. of scaffolds | 1,133,810 | 1,893,930 |
incorrect contigs (mean) | 70,160(367) | 27,367(726) |
sum (bps) | 2,208,249,938 | 2,216,254,604 |