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Table 2 Comparison of performances of different methods on hybrid models

From: SNPInterForest: A new method for detecting epistatic interactions

  SNPInterForest BOOST SNPHarvester
  # of true positives
(N total = 250)
# of false positives # of true positives
(N total = 250)
# of false positives # of true positives
(N total = 250)
# of false positives
h2 = 0.4, MAF = 0.2 250 0 250 10 119 0
h2 = 0.4, MAF = 0.4 250 0 250 3 115 0
h2 = 0.3, MAF = 0.2 250 0 250 7 103 0
h2 = 0.3, MAF = 0.4 250 0 250 8 108 0
h2 = 0.2, MAF = 0.2 249 2 250 9 111 1
h2 = 0.2, MAF = 0.4 248 1 250 2 102 0