From: A multifaceted analysis of HIV-1 protease multidrug resistance phenotypes
With all data | Â | RTV | NFV | ATV | APV | IDV | LPV | SQV | TPV | DRV |
---|---|---|---|---|---|---|---|---|---|---|
CTL1 (Random) | % correct | 35 | 36 | 29 | 21 | 22 | 26 | 29 | 31 | 29 |
CTL1 (Random) | RMSE | 1.34 | 1.13 | 1.21 | 1.2 | 1.05 | 1.01 | 1.26 | 0.98 | 0.76 |
CTL2 (Average) | % correct | 46 | 43 | 62 | 60 | 62 | 56 | 57 | 47 | 34 |
CTL2 (Average) | RMSE | 0.60 | 0.54 | 0.36 | 0.34 | 0.26 | 0.28 | 0.41 | 0.67 | 0.67 |
Cluster-based | % correct | 81 | 75 | 74 | 70 | 63 | 67 | 65 | 50 | 67 |
Cluster-based | RMSE | 0.35 | 0.34 | 0.38 | 0.33 | 0.29 | 0.25 | 0.50 | 0.71 | 0.29 |
Without nonresistant clusters | Â | RTV | NFV | ATV | APV | IDV | LPV | SQV | TPV | DRV |
CTL1 (Random) | % correct | 78 | 66 | 45 | 27 | 22 | 29 | 34 | 18 | 29 |
CTL1 (Random) | RMSE | 0.54 | 0.68 | 0.84 | 0.97 | 0.86 | 0.83 | 1.06 | 1.00 | 0.74 |
CTL2 (Average) | % correct | 28 | 32 | 49 | 51 | 52 | 43 | 46 | 28 | 11 |
CTL2 (Average) | RMSE | 0.74 | 0.64 | 0.45 | 0.41 | 0.32 | 0.34 | 0.51 | 0.84 | 0.84 |
Cluster-based | % correct | 89 | 82 | 73 | 62 | 55 | 58 | 60 | 34 | 56 |
Cluster-based | RMSE | 0.26 | 0.23 | 0.38 | 0.40 | 0.36 | 0.31 | 0.62 | 0.89 | 0.36 |