MotifMap: integrative genome-wide maps of regulatory motif sites for model species

BMC Bioinformatics

Table 2 Non-redundant transcription factor binding sites

Species	# Transcription Factors	# Matrices	# Sites	# Sites FDR ≤ 0.1
Yeast	161	147	115,387	1,577
Worm	6	6	88,895	69
Fly	94	66	191,655	36,091
Mouse	473	575	6,617,325	740,685
Human (hg18)	468	570	2,554,732	519,108
Human (hg19)	468	530	1,410,309	457,198

Number of non-redundant transcription factors and binding sites across the genome (see text for definition of "non-redundant").

ISSN: 1471-2105