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Table 1 Namespaces and abbreviations used in the text.

From: Scenario driven data modelling: a method for integrating diverse sources of data and data streams

Name URI Description Reference
DBpedia http://www.dbpedia.org/ Ontology of wikipedia entries DBpedia: A Nucleus for a Web of Open Data
SO [sequence ontology] http://www.sequenceontology.org/ Ontology of genetic sequences The Sequence Ontology: a tool for the unification of genome annotations
GO [gene ontology] http://www.geneontology.org/ Ontology of biological information Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
Bio2RDF http://bio2rdf.org/ Converts biological info into RDF Bio2RDF: Towards a mashup to build bioinformatics knowledge systems
Scenario http://www.BioSITES.org/scenario Ontology of the BioSITES terms  
Interpro http://www.ebi.ac.uk/interpro/ Database of protein sequences InterProScan – an integration platform for the signature-recognition methods in InterPro
ProMed http://www.ProMedmail.org/ Collection of public health articles ProMed-mail: An Early Warning System for Emerging Diseases
GeoNames http://www.geonames.org/ Database of GPS locations around the world Interlinking Open Data on the Web