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Table 1 Namespaces and abbreviations used in the text.

From: Scenario driven data modelling: a method for integrating diverse sources of data and data streams

Name URI Description Reference
DBpedia Ontology of wikipedia entries DBpedia: A Nucleus for a Web of Open Data
SO [sequence ontology] Ontology of genetic sequences The Sequence Ontology: a tool for the unification of genome annotations
GO [gene ontology] Ontology of biological information Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
Bio2RDF Converts biological info into RDF Bio2RDF: Towards a mashup to build bioinformatics knowledge systems
Scenario Ontology of the BioSITES terms  
Interpro Database of protein sequences InterProScan – an integration platform for the signature-recognition methods in InterPro
ProMed Collection of public health articles ProMed-mail: An Early Warning System for Emerging Diseases
GeoNames Database of GPS locations around the world Interlinking Open Data on the Web