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Table 2 Results of cancer fusion gene detection simulations

From: Genotyping common and rare variation using overlapping pool sequencing

Parameter Values (Num Pools, Coverage, Error Rate) # of Samples with Fusion
  1 2 3
(10, 4 , 0.01) 0.980 0.760 0.340
(10, 12 , 0.01) 0.990 0.970 0.700
(10, 16, 0.01) 1.000 0.980 0.780
(10, 20, 0.01) 1.000 0.930 0.790
(10, 24, 0.01) 1.000 0.990 0.810
(10, 28, 0.01) 0.990 0.970 0.840
(4, 28, 0.01) 0.180 0.030 0.000
(6, 28, 0.01) 0.550 0.230 0.050
(8, 28, 0.01) 1.000 0.900 0.410
  1. Each entry in the table is the fraction that the algorithm correctly identified the samples harboring the fusion gene.