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Table 4 Team evaluation results on the 50 and 507 articles using the silver standard annotations. Results are sorted by team numbers. All silver standard annotations were derived by the EM algorithm applied to team submissions over the full set of 507 test articles. The silver-standard annotations of the 50 selected articles (columns 2-4) are taken from the silver-standard annotations obtained on the 507 articles.

From: The gene normalization task in BioCreative III

Team_Runs Using silver standard (50 selected articles) Using silver standard (All 507 articles)
  TAP (K=5) TAP K=10 TAP (K=20) TAP (K = 5) TAP (K = 10) TAP (K = 20)
T63_R1 0.0504 0.1059 0.1438 0.1584 0.1961 0.1980
T63_R2 0.0393 0.0998 0.1355 0.1415 0.1890 0.1982
T65_R1 0.1039 0.1302 0.1532 0.1549 0.1818 0.2030
T65_R2 0.1133 0.1360 0.1581 0.1573 0.1868 0.2097
T68_R1 0.2282 0.2768 0.3221 0.3614 0.3787 0.3753
T68_R2 0.2136 0.2978 0.2978 0.3468 0.3641 0.3608
T70_R1 0.0130 0.0130 0.0130 0.1227 0.1227 0.1227
T70_R2 0.0166 0.0166 0.0166 0.1323 0.1323 0.1323
T70_R3 0.0560 0.0560 0.0560 0.1579 0.1579 0.1579
T74_R1 0.3820 0.3820 0.3820 0.4873 0.4873 0.4873
T74_R2 0.3855 0.3855 0.3855 0.4871 0.4871 0.4871
T74_R3 0.3890 0.3890 0.3890 0.4916 0.4916 0.4916
T78_R1 0.0552 0.0786 0.1152 0.1237 0.1529 0.1900
T78_R2 0.1058 0.1592 0.2166 0.2561 0.2751 0.2751
T78_R3 0.0979 0.1440 0.1997 0.2273 0.2765 0.2872
T80_R1 0.2579 0.2840 0.2840 0.4056 0.4056 0.4056
T80_R2 0.0716 0.1150 0.1220 0.2281 0.2281 0.2281
T80_R3 0.0792 0.1269 0.1329 0.2332 0.2397 0.2397
T83_R1 0.3567 0.3600 0.3600 0.4591 0.4591 0.4591
T83_R2 0.3291 0.3291 0.3291 0.4323 0.4323 0.4323
T83_R3 0.3382 0.3382 0.3382 0.4327 0.4327 0.4327
T89_R1 0.1767 0.2251 0.2251 0.2783 0.3111 0.3111
T89_R2 0.2161 0.2617 0.2992 0.2721 0.3057 0.3057
T89_R3 0.2091 0.2091 0.2091 0.2977 0.2977 0.2977
T93_R1 0.2614 0.3093 0.3093 0.4039 0.4039 0.4039
T93_R2 0.2101 0.2625 0.2966 0.3709 0.3820 0.3820
T93_R3 0.2553 0.3048 0.3048 0.4061 0.4061 0.4061
T97_R1 0.1094 0.1317 0.1566 0.1396 0.1676 0.1918
T97_R2 0.0858 0.1133 0.1352 0.1344 0.1601 0.1829
T97_R3 0.1094 0.1317 0.1566 0.1396 0.1676 0.1918
T98_R1 0.3343 0.3535 0.3629 0.3818 0.3899 0.3875
T98_R2 0.3354 0.3543 0.3634 0.3790 0.3878 0.3868
T98_R3 0.3710 0.4116 0.4672 0.4086 0.4511 0.4648
T101_R1 0.3590 0.3859 0.3859 0.4289 0.4289 0.4289
T101_R2 0.3239 0.3945 0.4132 0.4294 0.4408 0.4408
T101_R3 0.3258 0.4109 0.4109 0.4536 0.4536 0.4536