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Table 10 Performance statistics evaluated by TAP-K and F-measure on test data and training data sets.

From: Cross-species gene normalization by species inference

Corpus Data set TAP-5 TAP-10 TAP-20 Precision Recall F-measure
Test data (1st run) 50 (gold standard) 0.3254 0.3538 0.3535 53.85% 39.44% 45.53%
Test data (2nd run) 50 (gold standard) 0.3216 0.3435 0.3435 55.54% 39.07% 45.87%
Test data (3rd run) 50 (gold standard) 0.3297 0.3514 0.3514 56.23% 39.72% 46.56%
Test data (1st run) 50 (silver standard) 0.3567 0.3600 0.3600 58.94% 38.95% 46.90%
Test data (2nd run) 50 (silver standard) 0.3291 0.3291 0.3291 58.60% 37.64% 45.84%
Test data (3rd run) 50 (silver standard) 0.3382 0.3382 0.3382 59.46% 38.35% 46.62%
Test data (1st run) 507(silver standard) 0.4591 0.4591 0.4591 71.79% 44.69% 55.09%
Test data (2nd run) 507(silver standard) 0.4323 0.4323 0.4323 72.08% 42.70% 53.64%
Test data (3rd run) 507(silver standard) 0.4327 0.4327 0.4327 72.41% 42.82% 53.82%
Training data 32 (gold standard) 0.4703 0.4969 0.4969 63.82% 67.71% 65.70%