From: Consistency-based detection of potential tumor-specific deletions in matched normal/tumor genomes
Data Set | Deletions | Confl. Deletions | Del. ≥ 20 | Confl. Del. ≥ 20 |
---|---|---|---|---|
Normal | 949 | 7 + 0 (0.7%) | 851 | 6 + 0 (0.7%) |
Tumor | 27,054 | 1,312 +102 (5.2%) | 21,770 | 1,312 +102 (6.5%) |
Tumor-Subset | 476 | 33 + 15 (10.1%) | 333 | 14 + 14 (8.4%) |
Pooled Tumor-spec. | 20,698 | 101 + 363 (2.2%) | 16,578 | 50 + 250 (1.8%) |
Pooled-Subset Tumor-spec. | 203 | 1 + 12 (6.4%) | 146 | 1 + 7 (5.5%) |