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Table 3 Effect of parameter th on the identification of functional modules

From: Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data

Parameterth

Number of modules

Average size

% of significant modules

Average (-logP)

Significant modules(P)

     

<E-15

E-15 to E-10

E-10 to E-5

E-5 to 0.001

0.2

223

21.21

90.58

14.88

34.98%(78)

12.11%(27)

30.94%(69)

12.55%(28)

0.3

242

19.29

91.32

14.48

33.88%(82)

13.64%(33)

31.40%(76)

12.40%(30)

0.4

261

17.78

91.57

14.01

30.65%(80)

16.92%(42)

32.57%(85)

12.26%(32)

0.5

280

18.28

92.14

14.49

30.71%(86)

13.93%(39)

34.64%(97)

12.86%(36)

0.6

320

19.22

93.12

14.82

31.25%(100)

13.75%(44)

35.00%(112)

13.12%(42)