Minimalist ensemble algorithms for genome-wide protein localization prediction

BMC Bioinformatics

Table 3 Prediction performance (MCC Scores) of individual predictors for the Yeast Low-Res dataset

	YLoc (2010)	NetLoc (2010)	MultiLoc2 (2009)	KnowPred (2009)	Subcell (2008)	WoLFPSORT (2007)	BaCelLo (2006)	CELLO (2006)	SubLoc (2001)	LR with 8 predictors without NetLoc	LR with all 9 predictors
Cytosol	0.146	0.270	0.268	0.286	0.134	0.265	0.164	0.261	0.184	0.429	0.504
Mitochondrion	0.556	0.350	0.581	0.415	0.243	0.549	0.526	0.547	0.354	0.668	0.666
Nucleus	0.367	0.484	0.420	0.345	0.181	0.312	0.291	0.302	0.260	0.476	0.550
Secretory	0.314	0.473	0.339	0.534	0.326	0.568	0.339	0.534	0.391	0.607	0.664
Overall Accuracy	0.453	0.556	0.558	0.51	0.399	0.484	0.468	0.493	0.439	0.668	0.707

ISSN: 1471-2105