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Table 1 Summary from SWISSMODEL evaluation package pseudo-energies

From: Computational modeling of the bHLH domain of the transcription factor TWIST1 and R118C, S144R and K145E mutants

  

E47/NeuroD1

TWI_A/TWI_B wt

TWI_A/TWI_B R118C

TWI_A/TWI_B S144R

TWI_A/TWI_B K145E

E47/TWI wt

E47/TWI R118C

E47/TWI S144R

E47/TWI K145E

ENERGY ANALYSIS

DFIRE

-138.26

-143.02

-144.22

-144.23

-147.04

-146.4

-143.02

-146.87

-148.82

QMEAN6

0.668

0.762

0.757

0.806

0.804

0.854

0.835

0.840

0.855

Z-score

-0.98

0.02

-0.03

0.47

0.45

-0.93

0.73

0.79

0.94

RAMACHANDRAN PLOT

Most favored

95.2%

96.2%

97.1%

96.2%

97.1%

97.2%

95.3%

96.3%

96.3%

Allowed

1.9%

2.9%

2.9%

2.9%

2.9%

1.9%

3.7%

2.8%

2.8%

Generously allowed

1.9%

1.0%

0%

1.0%

0%

0%

0%

0.9%

0.9%

 

Disallowed

1.0% (K574/C)

0%

0%

0%

0%

0.9% (K32/A)

0.9% (K32/A)

0%

0%

  1. The bad scores are in bold, and the template scores are in bolditalic column. For the Ramachandran plot, the percentages were related to the amount of residues in each area of the plot. TWI – TWIST1 monomer; wt – wild-type.